Pre_GI: BLASTP Hits

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Query: NC_011205:609464:624336 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 624336, End: 624449, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:2529750:259204125920412592154114Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-1475.9
NC_013361:1558423:156711815671181567231114Escherichia coli O26:H11 str. 11368 chromosome, complete genomehost killing protein1e-0858.5
NC_013353:5361207:537288753728875373156270Escherichia coli O103:H2 str. 12009, complete genomehost killing protein2e-0754.3
AP010958:5361207:537288753728875373156270Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative host killing protein2e-0754.3
NC_002655:1332961:133849613384961338765270Escherichia coli O157:H7 EDL933, complete genomeputative Kil protein of bacteriphage BP-933W5e-0753.1
NC_012947:3015985:302380830238083024077270Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelambda Kil5e-0753.1
NC_013008:3231414:324155332415533241843291Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeKil protein of bacteriphage BP-933W5e-0753.1
NC_011751:1405381:141583814158381416107270Escherichia coli UMN026 chromosome, complete genomeHost killing protein from bacteriophage origin5e-0753.1
NC_011353:3276734:328680832868083286972165Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelambda Kil8e-0752.4
NC_012759:4132527:413753841375384137681144Escherichia coli BW2952 chromosome, complete genomeProtein kil8e-0752.4
NC_008563:1175035:118370311837031183972270Escherichia coli APEC O1, complete genomeKil protein1e-0652.4
NC_007946:1239278:124631512463151246584270Escherichia coli UTI89, complete genomeKil protein1e-0652.4
NC_013361:3112023:313265831326583132948291Escherichia coli O26:H11 str. 11368 chromosome, complete genomekil protein1e-0652
NC_013941:3300000:330559033055903305754165Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeKil protein of bacteriphage BP-933W2e-0651.6
NC_004431:1401681:140846014084601408603144Escherichia coli CFT073, complete genomehypothetical protein2e-0651.6