Pre_GI: BLASTP Hits

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Query: NC_011205:4718239:4744915 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4744915, End: 4745589, Length: 675

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:474502147450214745695675Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-108390
NC_006905:4638707:466770646677064668380675Salmonella enterica subsp. enterica serovar Choleraesuis strputative dienelactone hydrolase3e-108390
NC_004631:4687270:470697547069754707640666Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-105382
NC_011147:4460726:449655644965564497221666Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-104378
NC_011294:4560902:458760845876084588273666Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-103374
NC_011274:4538722:456540145654014566066666Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-103374
NC_010102:4745949:476556847655684766095528Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-88323
NC_015761:4355335:437335143733514374007657Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-81302
NC_016048:4163225:418218741821874182792606Oscillibacter valericigenes Sjm18-20, complete genomeputative hydrolase4e-34144
NC_016048:456732:467126467126467698573Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-26119
NC_009848:354202:380004380004380588585Bacillus pumilus SAFR-032, complete genomedienelactone hydrolase3e-26118
NC_016894:1092005:110896411089641109572609Acetobacterium woodii DSM 1030 chromosome, complete genomedienelactone hydrolase4e-21101
NC_017271:3057161:308042430804243081086663Xanthomonas campestris pv. raphani 756C chromosome, completecarboxymethylenebutenolidase4e-0961.6
NC_016591:202342:209305209305209997693Burkholderia sp. YI23 plasmid byi_2p, complete sequenceCarboxymethylenebutenolidase4e-0651.6