Pre_GI: BLASTP Hits

Some Help

Query: NC_011205:4718239:4735131 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4735131, End: 4735751, Length: 621

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:4517850:453471545347154535560846Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative outer membrane protein1e-107388
NC_011274:4538722:455538645553864556231846Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-107388
NC_011294:4560902:457756845775684578413846Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane protein6e-107386
NC_003198:4676536:470434647043464705191846Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative outer membrane protein1e-104378
NC_004631:4687270:468727046872704688115846Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative outer membrane protein1e-104378
NC_016832:4649432:466389346638934664738846Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-104378
NC_011147:4460726:447525044752504476089840Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane protein5e-102369
NC_006511:4465495:448002044800204480859840Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative outer membrane protein5e-102369
NC_011080:4543000:456353245635324564380849Salmonella enterica subsp. enterica serovar Newport str. SL254,SrgB8e-81299
NC_009512:5632591:568562956856295686531903Pseudomonas putida F1, complete genomeSdiA-regulated domain protein3e-23108
NC_011094:4442478:444877044487704449675906Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1891.7
NC_011083:4547825:455408045540804554985906Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein3e-1891.3
NC_003197:4551880:455817245581724559077906Salmonella typhimurium LT2, complete genomeputative inner membrane protein1e-1789.7
NC_004631:4381724:438793643879364388841906Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-1789.7
NC_003198:4397074:440328644032864404191906Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-1789.7
NC_011080:4543000:454929145492914550196906Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein1e-1789.7
NC_011294:4409137:441542844154284416333906Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-1789.7
NC_012125:4481808:448810044881004489005906Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-1789.7
NC_016810:4573172:457946445794644580369906Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1789.7
NC_016856:4563435:457171445717144572619906Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein1e-1789.7
NC_016857:4573173:457946545794654580370906Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein1e-1789.7
NC_016863:4513106:451932045193204520225906Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-1789.7
NC_016860:4649274:465561146556114656471861Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1789.7
NC_016832:4368948:437520543752054376065861Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,SdiA-regulated1e-1789.7
NC_011205:4564645:457296945729694573829861Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853SdiA-regulated family protein1e-1789.7
NC_011149:4474012:448034944803494481209861Salmonella enterica subsp. enterica serovar Agona str. SL483,sdiA-regulated family protein1e-1789.7
NC_010102:4477836:448417344841734485033861Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1789.7
NC_006905:4486433:449272544927254493630906Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein1e-1789.7
NC_017046:4571833:457812545781254579030906Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-1789.7
NC_011274:4385039:439333643933364394241906Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-1789.4
NC_011147:4297513:430577343057734306678906Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1789.4
NC_016831:4367000:437352743735274374387861Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-1788.2
NC_009434:1068281:108676910867691087704936Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-1787.8
NC_015740:926920:945554945554946489936Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein4e-1787.8
NC_013941:4470932:451023745102374511055819Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-1580.9
NC_013008:4643825:468188946818894682707819Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor5e-1580.9
NC_011353:4688000:472584847258484726666819Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesdiA-regulated domain-containing protein5e-1580.9
NC_002695:4584177:462274446227444623562819Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-1580.9
NC_002655:4653160:469172746917274692545819Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-1580.9
NC_013716:3109700:314562131456213146439819Citrobacter rodentium ICC168, complete genomeLEE-associated conserved hypothetical protein5e-1477.8
NC_013364:3701895:371635637163563717174819Escherichia coli O111:H- str. 11128, complete genomehypothetical protein6e-1477.4
NC_011601:4096427:413651741365174137335819Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein8e-1477
NC_013361:5319497:533049353304935331311819Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1168.9
NC_013353:3669500:371257137125713713389819Escherichia coli O103:H2 str. 12009, complete genomeT3SS component3e-1168.6
AP010958:3669500:371257137125713713389819Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS component3e-1168.6
NC_007005:6056765:606171060617106062690981Pseudomonas syringae pv. syringae B728a, complete genomeSdiA-regulated1e-0963.2