Pre_GI: BLASTP Hits

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Query: NC_011205:2962270:2982396 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2982396, End: 2982509, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:2943912:296027829602782960391114Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-1374.3
NC_016832:2743801:276375327637532763866114Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1374.3
NC_016831:2779864:279999427999942800107114Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1374.3
NC_012125:2826624:287291628729162873029114Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1374.3
NC_011080:2897977:291434229143422914455114Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1374.3
NC_011083:2847318:291221329122132912326114Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1374.3
NC_011149:2829811:284616328461632846276114Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1374.3
NC_010102:2881714:290184729018472901957111Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1372.8
NC_016856:2896630:295793729579372958050114Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-1272