Pre_GI: BLASTP Hits

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Query: NC_011205:2180598:2202080 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2202080, End: 2202247, Length: 168

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2053991:207485220748522075229378Salmonella enterica subsp. enterica serovar Enteritidis strexported protein5e-26116
NC_016831:947281:968181968181968348168Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-26115
NC_011274:2044000:206598020659802066357378Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-25113
NC_011149:1987291:200946120094612009838378Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein9e-24108
NC_011601:2139188:215561321556132155990378Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-23107
NC_004547:1873390:190358219035821903959378Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-2199