Pre_GI: BLASTP Hits

Some Help

Query: NC_011205:2180598:2183148 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2183148, End: 2183885, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1330066:133710713371071337901795Salmonella enterica subsp. enterica serovar Paratyphi C strainEaD7e-66250
NC_004431:1401681:140248814024881402817330Escherichia coli CFT073, complete genomehypothetical protein4e-1685.1
NC_009436:2776410:282189828218982822329432Enterobacter sp. 638, complete genomehypothetical protein2e-0755.8
NC_016860:364981:371050371050371841792Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-0755.1
NC_013353:5361207:536932553693255370095771Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0754.7
AP010958:5361207:536932553693255370095771Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-0754.7
NC_004431:1401681:140521014052101405668459Escherichia coli CFT073, complete genomehypothetical protein2e-0653.1
NC_002655:1332961:133493113349311335704774Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W2e-0652.8