Pre_GI: BLASTP Hits

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Query: NC_011205:1345511:1359176 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1359176, End: 1359373, Length: 198

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1734292:175428717542871754484198Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage regulatory protein2e-31134
NC_003198:1908238:192490319249031925322420Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative regulator8e-1889
NC_016612:3803130:381419638141963814579384Klebsiella oxytoca KCTC 1686 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1682.8
NC_020181:2097066:211339821133982113721324Enterobacter aerogenes EA1509E, complete genomeputative regulator1e-1581.6