Pre_GI: BLASTP Hits

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Query: NC_011149:4677412:4689889 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 4689889, End: 4690125, Length: 237

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:4517850:453608545360854536381297Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-27119
NC_011205:4718239:473627647362764736572297Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-27119
NC_015663:1:118971189712148252Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-24112
NC_015663:1:230382303823289252Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-24110
NC_020181:421941:431558431558431671114Enterobacter aerogenes EA1509E, complete genomeFIG01048645: hypothetical protein4e-0960.1
NC_009792:808332:817382817382817714333Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-0959.3