Pre_GI: BLASTP Hits

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Query: NC_011149:2829811:2846163 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2846163, End: 2846276, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:2943912:296027829602782960391114Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein7e-1475.9
NC_016832:2743801:276375327637532763866114Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1475.9
NC_016831:2779864:279999427999942800107114Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-1475.9
NC_012125:2826624:287291628729162873029114Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-1475.9
NC_011080:2897977:291434229143422914455114Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein7e-1475.9
NC_011083:2847318:291221329122132912326114Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein7e-1475.9
NC_010102:2881714:290184729018472901957111Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1374.3
NC_011205:2962270:298239629823962982509114Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-1374.3
NC_016856:2896630:295793729579372958050114Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-1373.6