Pre_GI: BLASTP Hits

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Query: NC_011149:2802199:2809218 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2809218, End: 2810882, Length: 1665

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:866157:8760918760918779051815Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-61238
NC_015731:3274739:3283989328398932857881800Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein3e-46186
NC_014323:3195178:3205205320520532069321728Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-27124
NC_012881:3004784:3024312302431230259971686Desulfovibrio salexigens DSM 2638, complete genomeKAP P-loop domain protein2e-1894.4
NC_010515:2691000:2700649270064927021271479Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencehypothetical protein6e-1686.3
NC_007575:1484305:1491585149158514929341350Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein3e-1273.9
NC_007908:4677856:4685691468569146879162226Rhodoferax ferrireducens T118, complete genomeKAP P-loop1e-0758.9
NC_008255:1701195:1721072172107217229461875Cytophaga hutchinsonii ATCC 33406, complete genomehypothetical protein2e-0757.8
NC_011979:3409610:3422675342267534244171743Geobacter sp. FRC-32, complete genomehypothetical protein3e-0653.9
NC_014330:1541874:1561883156188315639402058Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative KAP NTPase P-loop domain-containing protein5e-0653.5