Pre_GI: BLASTP Hits

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Query: NC_011149:1987291:1998652 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1998652, End: 1999788, Length: 1137

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017511:602000:6080406080406090801041Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein1e-42173
NC_007925:3933765:3939771393977139408351065Rhodopseudomonas palustris BisB18, complete genomeconserved hypothetical protein, putative phage associated protein1e-37157
NC_015847:808931:8261138261138272071095Methanococcus maripaludis XI chromosome, complete genomehypothetical protein7e-34145
NC_011138:105196:1130791130791141671089Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein1e-32140
NC_013421:701005:7122817122817133721092Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-31135
NC_014910:242845:269905269905270819915Alicycliphilus denitrificans BC chromosome, complete genomephage associated protein1e-29130