Pre_GI: BLASTP Hits

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Query: NC_011147:2496808:2515433 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2515433, End: 2515627, Length: 195

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:2501500:251989725198972520091195Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCantirestriction protein3e-30130
NC_016860:364981:376110376110376304195Salmonella enterica subsp. enterica serovar Typhimurium strputative antirestriction protein7e-29125
NC_011742:1177946:118819111881911188391201Escherichia coli S88 chromosome, complete genomeRestriction inhibitor protein ral (Antirestriction protein)5e-2199.8
NC_007946:1239278:124721512472151247415201Escherichia coli UTI89, complete genomelambda ant-restriction protein5e-2199.8
NC_004431:1401681:140936014093601409560201Escherichia coli CFT073, complete genomeLambda ant-restriction protein5e-2199.8
NC_011083:374000:384219384219384371153Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein7e-2199
NC_007946:2625461:263153526315352631735201Escherichia coli UTI89, complete genomebacteriophage lambda restriction inhibitor protein ral1e-2098.2
NC_012947:3015985:302297730229773023177201Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completerestriction inhibitor protein ral (antirestriction protein)2e-2097.4
NC_011740:2072173:211279621127962112996201Escherichia fergusonii ATCC 35469, complete genomeRestriction inhibitor protein ral (Antirestriction protein)2e-2097.4
NC_013364:2645438:265372726537272653927201Escherichia coli O111:H- str. 11128, complete genomerestriction inhibitor protein2e-2097.4
NC_012759:4132527:413968841396884139810123Escherichia coli BW2952 chromosome, complete genomeLambda ant-restriction protein7e-0855.8