Pre_GI: BLASTP Hits

Some Help

Query: NC_011094:688626:704759 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 704759, End: 704995, Length: 237

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2402893:240289324028932403129237Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-28123
NC_016832:2363136:236422823642282364464237Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-28123
NC_016810:604813:621298621298621534237Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-28123
NC_003197:606048:621810621810622046237Salmonella typhimurium LT2, complete genomeputative periplasmic protein5e-28123
NC_011083:654479:670240670240670476237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-28123
NC_011080:610428:626217626217626453237Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-28123
NC_010102:2495441:249601424960142496250237Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-28123
NC_004631:2366335:236742723674272367663237Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical secreted protein5e-28123
NC_003198:598000:613438613438613674237Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical secreted protein5e-28123
NC_016856:606742:622504622504622740237Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-28123
NC_016857:604792:621298621298621534237Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Hypothetical secreted protein5e-28123
NC_012125:600586:620790620790621026237Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-28123
NC_011294:585500:601268601268601504237Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-28123
NC_011274:603901:619640619640619876237Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-28123
NC_011205:645591:666804666804667040237Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-28123
NC_006905:651732:671962671962672198237Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic protein5e-28123
NC_017046:604789:621295621295621531237Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-28123
NC_016863:606742:622503622503622739237Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein5e-28123
NC_016860:644095:659857659857660093237Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-28123
NC_011149:588895:604683604683604919237Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein7e-28122
NC_011147:2247460:224803322480332248269237Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-27120
NC_006511:2251022:225284922528492253085237Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical secreted protein3e-27120
NC_015761:520858:536420536420536656237Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-26118
NC_012947:3487392:349418934941893494425237Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein4e-1270.1
NC_011415:351810:352412352412352663252Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-1270.1
NC_013941:378555:399568399568399819252Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-1270.1
NC_000913:303719:317555317555317791237Escherichia coli K12, complete genomehypothetical protein1e-1168.6
NC_010473:279948:293105293105293341237Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein1e-1168.6
NC_008253:334467:394992394992395228237Escherichia coli 536, complete genomehypothetical secreted protein1e-1168.6
NC_011742:291237:327662327662327898237Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1168.6
NC_011745:333061:354696354696354932237Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1168.6
NC_007946:289425:338297338297338548252Escherichia coli UTI89, complete genomehypothetical protein YkgI precursor1e-1168.6
NC_004431:364000:402825402825403076252Escherichia coli CFT073, complete genomeHypothetical protein ykgI precursor1e-1168.6
AC_000091:303719:317555317555317791237Escherichia coli W3110 DNA, complete genomehypothetical protein1e-1168.6