Pre_GI: BLASTP Hits

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Query: NC_011094:638552:648516 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 648516, End: 649652, Length: 1137

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014838:254322:2613532613532625131161Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein7e-62238
NC_020260:1293860:1298651129865113001051455Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-47190
NC_009436:2395913:2407571240757124088421272Enterobacter sp. 638, complete genomehypothetical protein3e-47189
NC_017047:1934430:1939710193971019412211512Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-38160
NC_015062:58826:7082370823721121290Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein1e-38160
NC_016816:2925459:2938579293857929398861308Pantoea ananatis LMG 5342, complete genomehypothetical protein3e-28126