Pre_GI: BLASTP Hits

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Query: NC_011094:4361238:4403715 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 4403715, End: 4404029, Length: 315

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016612:1790256:180314718031471803461315Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-37153
NC_020181:3585898:358977035897703590084315Enterobacter aerogenes EA1509E, complete genomePutative membrane protein, clustering with ActP1e-35148
NC_008570:2216736:226198822619882262299312Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein2e-27120
NC_008463:1912348:194562619456261945937312Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-23107
NC_007510:3340008:337378533737853374090306Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF4852e-1064.7
NC_007510:1959883:198670719867071987069363Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF4851e-0858.5