Pre_GI: BLASTP Hits

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Query: NC_011094:2061000:2070671 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2070671, End: 2071633, Length: 963

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:2040396:204898420489842049946963Salmonella enterica subsp. enterica serovar Agona str. SL483,transporter, EamA family3e-143508
NC_016816:3952000:396032639603263961291966Pantoea ananatis LMG 5342, complete genometransporter, EamA family7e-111400
NC_011772:4565418:457925345792534580197945Bacillus cereus G9842, complete genometransporter, EamA family3e-56219
NC_011725:4600000:461399746139974614941945Bacillus cereus B4264 chromosome, complete genometransporter EamA family5e-56218
UCMB5137:2418403:243276824327682433736969Bacillus atrophaeus UCMB-5137drug/metabolite exporter family protein5e-50198
NC_014639:2452286:246679824667982467766969Bacillus atrophaeus 1942 chromosome, complete genomedrug/metabolite exporter family protein2e-49196
CP002207:2452286:246679824667982467766969Bacillus atrophaeus 1942, complete genomedrug/metabolite exporter family protein2e-49196
NC_020244:2509000:2535353253535325363751023Bacillus subtilis XF-1, complete genomeputative efflux transporter8e-49194
NC_000964:2702376:271991327199132720878966Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-48192
NC_014622:5315500:5341635534163553426601026Paenibacillus polymyxa SC2 chromosome, complete genomepermease, drug/metabolite transporter superfamily7e-42171
NC_014966:1668822:1678481167848116809852505Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein7e-38157
NC_019896:1483073:150537215053721505911540Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetransport protein YrdR5e-21102
NC_019896:17873:244662446625383918Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetransport protein YyaM9e-0754.7
NC_014976:2175667:218663721866372187554918Bacillus subtilis BSn5 chromosome, complete genomeputative efflux transporter1e-0653.9