Pre_GI: BLASTP Hits

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Query: NC_011092:9974:29333 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 29333, End: 30217, Length: 885

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011586:268927:293375293375294259885Acinetobacter baumannii AB0057 chromosome, complete genomeregulator protein PecM3e-131468
NC_010410:3606826:364094336409433641827885Acinetobacter baumannii AYE, complete genomeconserved hypothetical protein; putative membrane protein (PecM-like)3e-131468
NC_009925:5957806:596125859612585962133876Acaryochloris marina MBIC11017, complete genomecarboxylate/amino acid/amine transporter, putative4e-62238
NC_011283:819970:835695835695836591897Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein5e-50197
NC_008711:1224164:123427412342741235200927Arthrobacter aurescens TC1, complete genomeputative transmembrane protein1e-42173
NC_014391:6000834:6020280602028060214731194Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein7e-34144
NC_014311:3348102:336116933611693362098930Ralstonia solanacearum PSI07 chromosome, complete genometransmembrane protein2e-30133
NC_014307:3240430:325817432581743259103930Ralstonia solanacearum CFBP2957 chromosome, complete genometransmembrane protein3e-27122
NC_012912:4167429:417000941700094170866858Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF6 transmembrane6e-22104
NC_016884:760000:776110776110777003894Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehypothetical protein7e-0754.7
NC_014838:589581:609583609583610491909Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein9e-0651.2