Pre_GI: BLASTP Hits

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Query: NC_011092:76993:99827 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 99827, End: 100093, Length: 267

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:1795576:182305518230551823360306Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein1e-1478.6
NC_016818:2836851:285723628572362857541306Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein4e-1476.6
NC_016612:5296076:529747552974755297780306Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-1375.1
NC_009792:859228:873434873434873739306Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0754.7
NC_009650:65732:678226782268175354Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4,hypothetical protein6e-0753.1
NC_012731:3411161:345991834599183460223306Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative dopa decarboxylase protein remnant1e-0651.6
NC_011745:2209288:220962722096272209932306Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-0650.8