Pre_GI: BLASTP Hits

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Query: NC_011083:3171171:3180299 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 3180299, End: 3180472, Length: 174

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:3700640:370745037074503707743294Enterobacter cloacae SCF1 chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIB1e-25115
NC_010468:1816359:182549518254951825788294Escherichia coli ATCC 8739, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-2096.3