Pre_GI: BLASTP Hits

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Query: NC_011083:2847318:2856479 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 2856479, End: 2857291, Length: 813

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2896651:290327929032792904106828Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein8e-158556
NC_016863:2844883:285045028504502851277828Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein8e-158556
NC_016857:2871689:290453729045372905364828Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein8e-158556
NC_016856:2896630:290219729021972903024828Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein8e-158556
NC_016810:2871689:290453729045372905364828Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-158556
NC_003197:2870268:288197228819722882799828Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein8e-158556
NC_016860:2896254:290553829055382906350813Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein1e-157555
NC_010529:23775:380063800638971966Cupriavidus taiwanensis plasmid pRALTA, complete sequencehypothetical protein5e-31134
NC_008758:12000:130061300613941936Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completehypothetical protein1e-1273.6
NC_008782:2326439:234835423483542349265912Acidovorax sp. JS42, complete genomehypothetical protein2e-1273.2
NC_011420:1178762:118864111886411189555915Rhodospirillum centenum SW, complete genomehypothetical protein1e-0963.9
NC_005139:2201820:226019922601992261113915Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-0653.1