Pre_GI: BLASTP Hits

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Query: NC_011035:829945:875039 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 875039, End: 875794, Length: 756

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015580:1584078:160654416065441607308765Novosphingobium sp. PP1Y, complete genomeconjugal transfer pilus assembly protein TrbC2e-0963.2
NC_009998:62000:808780878827741Shewanella baltica OS195 plasmid pS19501, complete sequencetype-F conjugative transfer system pilin assembly protein TrbC1e-0860.5
NC_007490:76838:760897608976841753Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequenceTrbC, sex pilus assembly and mating pair formation protein2e-0859.7
NC_009650:65732:861898618986827639Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4,conjugal transfer pilus assembly protein TrbC2e-0755.8
NC_007722:2954876:298765029876502988399750Erythrobacter litoralis HTCC2594, complete genomehypothetical protein3e-0652.4