Pre_GI: BLASTP Hits

Some Help

Query: NC_011035:829945:865739 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 865739, End: 865996, Length: 258

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013592:2703327:2710622271062227123161695Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 247e-1165.9
NC_014500:2019113:2037269203726920389631695Dickeya dadantii 3937 chromosome, complete genomeLysozyme8e-1165.9
NC_015137:2582467:258418625841862584836651Burkholderia sp. CCGE1001 chromosome 2, complete sequenceglycoside hydrolase family 242e-0754.7
NC_009648:3803622:381947238194723819969498Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage endolysin, control of lysis5e-0753.1
NC_003198:1908238:191258519125851913061477Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative endolysin7e-0752.8
NC_013941:3182576:318534331853433185819477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysozyme9e-0752.4
NC_008314:1465643:146609414660941466729636Ralstonia eutropha H16 chromosome 2, complete sequenceMuramidase (phage lysozyme)9e-0752.4
NC_009800:289000:309479309479309955477Escherichia coli HS, complete genomephage lysozyme2e-0651.2
NC_011283:2836000:289756728975672898046480Klebsiella pneumoniae 342 chromosome, complete genomephage lysozyme2e-0651.2
NC_012947:3015985:301644330164433016919477Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLysozyme2e-0650.8
NC_012125:1330066:135294813529481353421474Salmonella enterica subsp. enterica serovar Paratyphi C strainlysin2e-0650.8
NC_017328:303987:325599325599326075477Shigella flexneri 2002017 chromosome, complete genomeR protein2e-0650.8
NC_006905:368942:391670391670392146477Salmonella enterica subsp. enterica serovar Choleraesuis strlysin2e-0650.8
NC_020063:2565605:257210025721002572576477Enterobacteriaceae bacterium strain FGI 57, complete genomemuramidase (phage lambda lysozyme)9e-0648.9