Pre_GI: BLASTP Hits

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Query: NC_011004:3582078:3587744 Rhodopseudomonas palustris TIE-1, complete genome

Start: 3587744, End: 3589258, Length: 1515

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011894:585637:6096256096256113371713Methylobacterium nodulans ORS 2060, complete genomeCMP/dCMP deaminase zinc-binding1e-157556
NC_010172:2082000:2087401208740120888671467Methylobacterium extorquens PA1, complete genomeCMP/dCMP deaminase zinc-binding9e-136484
NC_011757:276953:2894972894972912061710Methylobacterium chloromethanicum CM4, complete genomeCMP/dCMP deaminase zinc-binding3e-103376
NC_008825:564392:5718055718055733731569Methylibium petroleiphilum PM1, complete genomeputative cytidine deaminase1e-73278
NC_007614:109000:1249241249241263931470Nitrosospira multiformis ATCC 25196 chromosome 1, completeCytidine/deoxycytidylate deaminase, zinc-binding region3e-72273
NC_016631:5478098:5491916549191654934541539Granulicella mallensis MP5ACTX8 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein2e-71270
NC_004547:138500:1488111488111503911581Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative deoxycytidylate deaminase2e-62240
NC_015572:1:4863448634501331500Methylomonas methanica MC09 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein2e-61236
NC_012668:442601:4620454620454636431599Vibrio cholerae MJ-1236 chromosome 1, complete sequencedeoxycytidylate deaminase-related protein6e-57222
NC_012667:703852:7236167236167252141599Vibrio cholerae MJ-1236 chromosome 2, complete genomedeoxycytidylate deaminase-related protein6e-57222
NC_002505:168532:1753431753431769411599Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completedeoxycytidylate deaminase-related protein6e-57222
NC_016944:168530:1753411753411769301590Vibrio cholerae IEC224 chromosome I, complete sequencedeoxycytidylate deaminase-likeprotein6e-57222
NC_016445:2593800:2600611260061126022001590Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completedeoxycytidylate deaminase-related protein6e-57222
NC_014910:465980:5007665007665024391674Alicycliphilus denitrificans BC chromosome, complete genomecmp/dcmp deaminase zinc-binding protein2e-51203
NC_004578:20738:5834458344599061563Pseudomonas syringae pv. tomato str. DC3000, complete genomecytidine/deoxycytidylate deaminase family protein3e-48193
NC_013861:728648:7343167343167358931578Legionella longbeachae NSW150, complete genomecytidine/deoxycytidylate deaminase6e-39162
NC_017186:2252438:228089522808952281389495Amycolatopsis mediterranei S699 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein4e-22106
NC_012780:430653:4370594370594389391881Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencedCMP deaminase3e-1273.6
NC_019903:3537545:354427835442783544748471Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,deoxycytidylate deaminase2e-1171.2
NC_007498:1666242:168911816891181689594477Pelobacter carbinolicus DSM 2380, complete genomedeoxycytidylate deaminase4e-1170.1
NC_007963:814148:8218578218578236861830Chromohalobacter salexigens DSM 3043, complete genomeCMP/dCMP deaminase, zinc-binding1e-1068.6
NC_019970:2551607:256020825602082560654447Thermoanaerobacterium thermosaccharolyticum M0795, complete genomedeoxycytidylate deaminase1e-0965.1
NC_015555:2259500:228835222883522288837486Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCMP/dCMP deaminase zinc-binding protein1e-0965.1
NC_017192:88940:111719111719112156438Arcobacter sp. L, complete genomeputative dCMP deaminase1e-0862
NC_009922:2766397:277182827718282772265438Alkaliphilus oremlandii OhILAs, complete genomeCMP/dCMP deaminase zinc-binding4e-0860.1
NC_009633:365325:378757378757379197441Alkaliphilus metalliredigens QYMF chromosome, complete genomeCMP/dCMP deaminase8e-0858.9
NC_015416:1645419:166117016611701661631462Methanosaeta concilii GP-6 chromosome, complete genomedCMP deaminase3e-0757.4
NC_014836:1180454:119610111961011196565465Desulfurispirillum indicum S5 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein3e-0653.9