Pre_GI: BLASTP Hits

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Query: NC_011004:2457778:2472605 Rhodopseudomonas palustris TIE-1, complete genome

Start: 2472605, End: 2472874, Length: 270

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014834:2206119:221867522186752218965291Rhodopseudomonas palustris DX-1 chromosome, complete genome2e-1477.4
NC_009667:1371924:137862013786201378910291Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator2e-0754.7
NC_006569:69939:809618096181179219Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceDNA-binding protein, putative3e-0753.9
NC_009718:1411793:143010814301081430635528Fervidobacterium nodosum Rt17-B1, complete genomecupin 2 domain-containing protein9e-0752.4
NC_017249:18493:345743457434855282Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-0650.8
NC_004463:18497:345793457934860282Bradyrhizobium japonicum USDA 110, complete genomeprobable transcriptional regulator3e-0650.8
NC_011146:3720658:374169537416953742027333Geobacter bemidjiensis Bem, complete genometranscriptional regulator, XRE family5e-0649.7