Pre_GI: BLASTP Hits

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Query: NC_011001:372185:380678 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Start: 380678, End: 381016, Length: 339

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010515:1124298:113773311377331138053321Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype IV secretory pathway VirB3 family protein4e-47186
NC_008061:2106848:212028121202812120619339Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetype IV secretory pathway, VirB3-like2e-46184
NC_008543:127675:149168149168149488321Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetype IV secretory pathway, VirB3 family protein8e-43172
NC_010676:2793237:279570427957042796048345Burkholderia phytofirmans PsJN chromosome 2, complete sequencetype IV secretory pathway VirB3 family protein1e-31134
NC_010524:933191:937131937131937463333Leptothrix cholodnii SP-6, complete genometype IV secretory pathway VirB3 family protein2e-1064.3
NC_013592:2968500:2998530299853030012742745Dickeya dadantii Ech586, complete genomeCagE, TrbE, VirB component of type IV transporter system, conserved region2e-0754.7