Pre_GI: BLASTP Hits

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Query: NC_010816:621849:628293 Bifidobacterium longum DJO10A, complete genome

Start: 628293, End: 628691, Length: 399

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017218:1042298:104937410493741049817444Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeEamA-like transporter domain protein4e-55213
NC_015052:1094825:110985011098501110227378Bifidobacterium longum subsp. infantis 157F, complete genometransport protein1e-52204
NC_017219:1622050:162760016276001628025426Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transport protein2e-52204
NC_014616:1065500:107826310782631078499237Bifidobacterium bifidum S17 chromosome, complete genomehypothetical protein4e-1167
NC_014638:1043854:106714810671481067324177Bifidobacterium bifidum PRL2010 chromosome, complete genomechloramphenicol-sensitive protein RarD1e-1065.1
NC_008686:2417000:242801224280122428923912Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRarD protein, DMT superfamily transporter2e-0754.3
NC_013595:606096:608716608716609624909Streptosporangium roseum DSM 43021, complete genomeRarD protein, DMT superfamily transporter3e-0650.4
NC_012559:1301988:1303807130380713051291323Laribacter hongkongensis HLHK9, complete genomeRarD6e-0649.7