Pre_GI: BLASTP Hits

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Query: NC_010816:170175:173845 Bifidobacterium longum DJO10A, complete genome

Start: 173845, End: 174255, Length: 411

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004307:151854:155512155512155946435Bifidobacterium longum NCC2705, complete genomenarrowly conserved hypothetical protein8e-76281
NC_015067:1528984:154315615431561543590435Bifidobacterium longum subsp. longum JCM 1217, complete genomehypothetical protein8e-76281
NC_015052:1569255:158770315877031588152450Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein1e-73274
NC_018720:2039000:205339220533922053802411Bifidobacterium asteroides PRL2011 chromosome, complete genomehypothetical protein1e-49194
NC_012880:3125261:313287231328723133237366Dickeya dadantii Ech703, complete genomeuncharacterized protein YneG2e-31134
NC_010510:139685:140522140522140881360Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completehypothetical protein7e-30129
NC_005791:1173000:118269311826931183064372Methanococcus maripaludis S2, complete genomeputative cytoplasmic protein8e-30129
NC_015847:1261276:127006612700661270437372Methanococcus maripaludis XI chromosome, complete genomeputative cytoplasmic protein2e-29127
NC_010067:1414000:142254814225481422907360Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-28124
NC_009792:1479779:149536714953671495726360Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-27121
NC_009778:1717458:175722517572251757572348Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-27120
NC_010498:1615980:163680816368081637167360Escherichia coli SMS-3-5, complete genomehypothetical protein2e-27120
NC_016902:2361628:238084123808412381200360Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-27120
CP002516:2361628:238084123808412381200360Escherichia coli KO11, complete genomehypothetical protein2e-27120
NC_009975:1374500:137951613795161379881366Methanococcus maripaludis C6, complete genomeconserved hypothetical protein8e-27119
NC_014562:469154:486398486398486823426Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein yneG9e-26115
NC_014733:1223359:122892712289271229394468Methylovorus sp. MP688 chromosome, complete genomehypothetical protein4e-25113
NC_009637:438037:452127452127452435309Methanococcus maripaludis C7 chromosome, complete genomeputative cytoplasmic protein1e-21102
NC_014414:2540189:254947825494782550053576Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein6e-1682.8