Pre_GI: BLASTP Hits

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Query: NC_010816:1319921:1348894 Bifidobacterium longum DJO10A, complete genome

Start: 1348894, End: 1349100, Length: 207

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015052:1030708:105372510537251053967243Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein1e-1375.5
NC_019673:8348604:837424483742448374498255Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-0856.2
NC_008578:591357:592846592846593097252Acidothermus cellulolyticus 11B, complete genometranscription factor WhiB9e-0855.8
NC_015312:3675148:373739737373973737654258Pseudonocardia dioxanivorans CB1190 chromosome, complete genometranscription factor WhiB3e-0753.9
NC_013174:2455420:246855724685572468922366Jonesia denitrificans DSM 20603, complete genometranscription factor WhiB4e-0753.5
NC_013174:2321000:233502423350242335389366Jonesia denitrificans DSM 20603, complete genometranscription factor WhiB4e-0753.5
NC_013521:940495:959515959515959763249Sanguibacter keddieii DSM 10542, complete genometranscription factor WhiB5e-0753.1
NC_012704:1747539:176677417667741767034261Corynebacterium kroppenstedtii DSM 44385, complete genomeputative transcriptional regulator, WhiB family5e-0753.1
NC_009342:951761:965783965783966043261Corynebacterium glutamicum R chromosome, complete genomehypothetical protein8e-0752.4
NC_003450:788000:805532805532805792261Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein8e-0752.4
NC_016109:5455060:546957554695755469826252Kitasatospora setae KM-6054, complete genomeputative WhiB family transcriptional regulator1e-0652
NC_013595:9149273:916781091678109168064255Streptosporangium roseum DSM 43021, complete genometranscription factor WhiB6e-0649.7