Pre_GI: BLASTP Hits

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Query: NC_010673:82586:88906 Borrelia hermsii DAH, complete genome

Start: 88906, End: 89526, Length: 621

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:79100:888348883489454621Borrelia turicatae 91E135, complete genomeV-type sodium ATP synthase subunit D6e-94343
NC_011244:94756:101077101077101673597Borrelia recurrentis A1, complete genomeV-type ATP synthase subunit D1e-87322
NC_015408:1035690:104967710496771050303627Chlamydophila pecorum E58 chromosome, complete genomeV-type ATPase subunit D6e-1994
NC_012225:2198987:220795022079502208549600Brachyspira hyodysenteriae WA1, complete genomeV-type ATP synthase subunit D4e-1374.3
NC_015160:2295010:231529823152982315897600Odoribacter splanchnicus DSM 20712 chromosome, complete genomeV-type ATPase, D subunit9e-1373.6
NC_017243:3141500:315027731502773150876600Brachyspira intermedia PWS/A chromosome, complete genomeV-type ATP synthase subunit D2e-1272.4
NC_018604:2579000:262077926207792621378600Brachyspira pilosicoli WesB complete genomeV-type ATP synthase subunit D6e-1167.4
NC_014330:1113145:113943111394311140030600Brachyspira pilosicoli 95/1000 chromosome, complete genomeV-type ATP synthase subunit D6e-1167.4
NC_018607:290500:301598301598302197600Brachyspira pilosicoli B2904 chromosome, complete genomeV-type ATP synthase subunit D2e-1065.9