Pre_GI: BLASTP Hits

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Query: NC_010673:703816:735625 Borrelia hermsii DAH, complete genome

Start: 735625, End: 736518, Length: 894

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:703740:733041733041733934894Borrelia turicatae 91E135, complete genomemevalonate kinase2e-131468
NC_011244:746801:747743747743748636894Borrelia recurrentis A1, complete genomemevalonate kinase3e-118424
NC_014960:1735786:178231217823121783253942Anaerolinea thermophila UNI-1, complete genomemevalonate kinase5e-0962
NC_015474:182701:1827011827011837021002Pyrococcus sp. NA2 chromosome, complete genomemevalonate kinase9e-0857.8
NC_004193:241480:246715246715247683969Oceanobacillus iheyensis HTE831, complete genomemevalonate kinase2e-0756.2
NC_000868:500249:5122295122295132361008Pyrococcus abyssi GE5, complete genomemevalonate kinase3e-0652.8
NC_009443:277246:278701278701279654954Streptococcus suis 98HAH33, complete genomemevalonate kinase5e-0652
NC_009442:277392:278847278847279800954Streptococcus suis 05ZYH33 chromosome, complete genomemevalonate kinase5e-0652
NC_013741:838243:839656839656840534879Archaeoglobus profundus DSM 5631, complete genomemevalonate kinase8e-0651.6
NC_012924:277325:278792278792279727936Streptococcus suis SC84, complete genomemevalonate kinase9e-0651.2
NC_012925:275704:279227279227280162936Streptococcus suis P1/7, complete genomemevalonate kinase9e-0651.2