Pre_GI: BLASTP Hits

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Query: NC_010673:703816:733754 Borrelia hermsii DAH, complete genome

Start: 733754, End: 734692, Length: 939

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:703740:731170731170732108939Borrelia turicatae 91E135, complete genomediphosphomevalonate decarboxylase2e-143508
NC_011244:746801:745872745872746813942Borrelia recurrentis A1, complete genomemevalonate pyrophosphate decarboxylase3e-126451
NC_004193:241480:247709247709248683975Oceanobacillus iheyensis HTE831, complete genomemevalonate diphosphate decarboxylase5e-1995.5
NC_015433:285581:2911452911452921701026Streptococcus suis ST3 chromosome, complete genomemevalonate diphosphate decarboxylase4e-1582.4
NC_012924:277325:2797202797202807451026Streptococcus suis SC84, complete genomemevalonate diphosphate decarboxylase1e-1480.9
NC_009443:277246:2796472796472806721026Streptococcus suis 98HAH33, complete genomemevalonate pyrophosphate decarboxylase1e-1480.9
NC_009442:277392:2797932797932808181026Streptococcus suis 05ZYH33 chromosome, complete genomemevalonate pyrophosphate decarboxylase1e-1480.9
NC_012925:275704:2801552801552811801026Streptococcus suis P1/7, complete genomemevalonate diphosphate decarboxylase1e-1480.9
NC_008095:6253610:627279062727906273788999Myxococcus xanthus DK 1622, complete genomediphosphomevalonate decarboxylase2e-1376.6