Pre_GI: BLASTP Hits

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Query: NC_010673:291679:299727 Borrelia hermsii DAH, complete genome

Start: 299727, End: 300158, Length: 432

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:277207:299022299022299450429Borrelia turicatae 91E135, complete genomeflagellar protein7e-40162
NC_011244:319373:318945318945319376432Borrelia recurrentis A1, complete genomeflagellar protein5e-37152
NC_017238:272980:296151296151296582432Borrelia afzelii PKo chromosome, complete genomeflagellar protein3e-22103
NC_011728:269853:296406296406296837432Borrelia burgdorferi ZS7, complete genomeflagellar protein5e-22103