Pre_GI: BLASTP Hits

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Query: NC_010673:291679:293786 Borrelia hermsii DAH, complete genome

Start: 293786, End: 294319, Length: 534

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:277207:293077293077293610534Borrelia turicatae 91E135, complete genomeflagellar protein FliL4e-95346
NC_011728:269853:290427290427290963537Borrelia burgdorferi ZS7, complete genomeflagellar basal body-associated protein FliL1e-83308
NC_001318:270488:291059291059291595537Borrelia burgdorferi B31, complete genomeflagellar protein1e-83308
NC_015921:272517:289608289608290144537Borrelia bissettii DN127 chromosome, complete genomeflagellar basal body-associated FliL family protein3e-83307
NC_008277:272741:289930289930290466537Borrelia afzelii PKo, complete genomeflagellar protein3e-83307
NC_017238:272980:290169290169290705537Borrelia afzelii PKo chromosome, complete genomeflagellar basal body-associated FliL family protein3e-83307
NC_006156:271410:289828289828290364537Borrelia garinii PBi chromosome linear, complete sequenceflagellar protein4e-83306
NC_000919:773784:789516789516790064549Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar protein3e-1787.8
NC_010741:775000:790964790964791512549Treponema pallidum subsp. pallidum SS14, complete genomeflagellar protein3e-1787.8
NC_015714:768500:784398784398784946549Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeflagellar basal body-associated protein FliL3e-1787.8
NC_016842:775368:791100791100791648549Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeflagellar basal body-associated protein FliL3e-1787.8
NC_016843:775371:791287791287791835549Treponema pallidum subsp. pertenue str. Gauthier chromosome,flagellar basal body-associated protein FliL3e-1787.8
NC_016844:775334:791454791454792002549Treponema pallidum subsp. pallidum DAL-1 chromosome, completeflagellar basal body-associated protein FliL3e-1787.8
NC_016848:775822:791554791554792102549Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeflagellar basal body-associated protein FliL3e-1787.8
NC_017268:775000:790766790766791314549Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar basal body-associated protein FliL3e-1787.8
NC_021508:775264:790996790996791544549Treponema pallidum subsp. pallidum SS14, complete genomeflagellar basal body-associated protein FliL3e-1787.8
NC_018604:492068:498525498525499073549Brachyspira pilosicoli WesB complete genomeendoflagellar basal body-associated protein4e-0754.3
NC_019908:1467000:147931714793171479862546Brachyspira pilosicoli P43/6/78 chromosome, complete genomeendoflagellar basal body-associated protein5e-0753.9
NC_014330:1784515:179073117907311791276546Brachyspira pilosicoli 95/1000 chromosome, complete genomeendoflagellar basal body-associated protein5e-0753.9
NC_018607:2375344:238696923869692387514546Brachyspira pilosicoli B2904 chromosome, complete genomeendoflagellar basal body-associated protein5e-0753.9
NC_017243:491681:506689506689507234546Brachyspira intermedia PWS/A chromosome, complete genomeflagellar basal body-associated protein6e-0753.5
NC_012225:1575432:160255516025551603100546Brachyspira hyodysenteriae WA1, complete genomeputative flagellar basal body-associated protein6e-0753.5
NC_014150:2201251:221370722137072214255549Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar basal body-associated protein FliL2e-0652