Pre_GI: BLASTP Hits

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Query: NC_010673:291679:291679 Borrelia hermsii DAH, complete genome

Start: 291679, End: 292320, Length: 642

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:277207:290968290968291612645Borrelia turicatae 91E135, complete genomeflagellar biosynthetic protein FliZ2e-68258
NC_017238:272980:288087288087288713627Borrelia afzelii PKo chromosome, complete genomeflagellar biosynthesis protein2e-33142
NC_008277:272741:287848287848288474627Borrelia afzelii PKo, complete genomeflagellar biosynthesis protein2e-33142
NC_015921:272517:287522287522288148627Borrelia bissettii DN127 chromosome, complete genomeflagellar biosynthesis protein2e-33142
NC_006156:271410:287739287739288365627Borrelia garinii PBi chromosome linear, complete sequenceflagellar biosynthesis protein2e-31135
NC_001318:270488:288957288957289583627Borrelia burgdorferi B31, complete genomeflagellar biosynthesis protein (fliZ)3e-31134
NC_011728:269853:288325288325288951627Borrelia burgdorferi ZS7, complete genomeflagellar biosynthesis protein FliZ3e-30131