Pre_GI: BLASTP Hits

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Query: NC_010612:4400260:4405461 Mycobacterium marinum M, complete genome

Start: 4405461, End: 4405673, Length: 213

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010397:1802724:1816245181624518174141170Mycobacterium abscessus chromosome Chromosome, complete sequencePhage integrase7e-24108
NC_013757:1499643:1499643149964315007581116Geodermatophilus obscurus DSM 43160, complete genomeintegrase family protein2e-1374.7
NC_018681:441014:4465234465234475961074Nocardia brasiliensis ATCC 700358 chromosome, complete genomeintegrase family protein2e-1374.3
NC_013757:2706835:271510527151052715509405Geodermatophilus obscurus DSM 43160, complete genome2e-1270.9
NC_016887:1714664:1719859171985917215111653Nocardia cyriacigeorgica GUH-2, complete genomeputative phage integrase fragment6e-1166.2
NC_013093:1411882:1429235142923514304161182Actinosynnema mirum DSM 43827, complete genomeintegrase family protein1e-0962
NC_019673:1275627:1295932129593212971401209Saccharothrix espanaensis DSM 44229 complete genomeIntegrase family protein1e-0858.2
NC_013757:1732747:174873617487361749002267Geodermatophilus obscurus DSM 43160, complete genome6e-0856.2
NC_013729:2157785:2179672217967221808651194Kribbella flavida DSM 17836, complete genomeintegrase family protein1e-0755.5
NC_009921:1736000:1753223175322317543651143Frankia sp. EAN1pec, complete genomeintegrase family protein3e-0754.3
NC_009142:827912:842451842451842786336Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein1e-0652
NC_013093:1213908:1236951123695112381051155Actinosynnema mirum DSM 43827, complete genomeintegrase family protein2e-0650.8
NC_016943:1560000:156378415637841563933150Blastococcus saxobsidens DD2, complete genomehypothetical protein6e-0649.7