Pre_GI: BLASTP Hits

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Query: NC_010609:880196:894015 Lactobacillus reuteri JCM 1112, complete genome

Start: 894015, End: 894776, Length: 762

Host Lineage: Lactobacillus reuteri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from the intestine of an adult human. They are commonly found in the oral, vaginal, and intestinal tracts of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained. These cultures produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also used as a starter molecule for complex organic molecule syntheses. Lactobacillus reuteri is a member of the normal microbial community of the gut in humans and animals. This organism produces antibiotic compounds, such as reutericin and reuterin, which have inhibitory effects on pathogenic microorganisms.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009513:870837:884638884638885417780Lactobacillus reuteri F275, complete genomeParB domain protein nuclease7e-145512
NC_009615:1001744:101259610125961013336741Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA methylase6e-28124
NC_017045:119046:126810126810127535726Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase4e-1582
NC_014738:2094000:212156121215612122286726Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase4e-1582
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease2e-1376.6
NC_018870:2316499:2354383235438323556361254Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase2e-1376.6
NC_016627:4323370:4352807435280743540601254Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase2e-1376.3
NC_014393:937000:9529689529689542211254Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-1376.3
NC_015520:2974048:2990245299024529914981254Mahella australiensis 50-1 BON chromosome, complete genomeParB domain-containing protein nuclease2e-1375.9
NC_014410:800500:8099698099698112221254Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein2e-1272.8
NC_014328:303063:3623603623603636041245Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative methylase2e-1272.8
NC_012491:3736167:3742439374243937437371299Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-1271.6
NC_003212:1713958:1740897174089717422341338Listeria innocua Clip11262, complete genomehypothetical protein4e-1168.6
NC_020207:1170000:1176467117646711776661200Enterococcus faecium NRRL B-2354, complete genomeDNA methylase5e-1168.2
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase5e-1168.2
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase1e-1067.4
NC_009012:1934107:1965665196566519669631299Clostridium thermocellum ATCC 27405, complete genomeDNA methylase N-4/N-69e-1167.4
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein8e-1167.4
NC_003909:386880:4081694081694094101242Bacillus cereus ATCC 10987, complete genomeDNA methylase, family protein2e-1066.6
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein2e-1066.6
NC_015697:506494:5218415218415230701230Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-1066.2
NC_016633:3069518:3099711309971131009551245Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA modification methylase3e-1065.9
NC_009706:2673906:2721831272183127230721242Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase5e-1065.1
NC_010320:1268355:1285298128529812865361239Thermoanaerobacter sp. X514 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein8e-1064.3
NC_013790:406681:417460417460418080621Methanobrevibacter ruminantium M1 chromosome, complete genomeParB-like nuclease domain-containing protein1e-0963.9
NC_011898:3367457:3396191339619133974321242Clostridium cellulolyticum H10, complete genomeDNA methylase N-4/N-6 domain protein1e-0963.5
NC_020207:1906803:191206119120611912357297Enterococcus faecium NRRL B-2354, complete genomeDNA methylase8e-0960.8
NC_014483:3339926:334542833454283345886459Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator3e-0859.3
NC_008530:1454118:1470694147069414719201227Lactobacillus gasseri ATCC 33323, complete genomeParB-like nuclease domain and DNA modification methylase domain3e-0858.9
NC_015697:468234:4808454808454820711227Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase4e-0858.5
NC_018867:1407163:1430026143002614312731248Dehalobacter sp. CF chromosome, complete genomeDNA methylase N-4/N-68e-0857.8
NC_015144:237467:257164257164257913750Weeksella virosa DSM 16922 chromosome, complete genomeDNA methylase2e-0756.2
NC_009633:4097536:4125793412579341270281236Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-0754.7
NC_012491:1187864:120306612030661203548483Brevibacillus brevis NBRC 100599, complete genomehypothetical protein8e-0754.3