Pre_GI: BLASTP Hits

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Query: NC_010572:4181403:4197985 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 4197985, End: 4198347, Length: 363

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016114:3008500:302407630240763024411336Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein5e-36149
NC_010572:3363830:339576433957643396105342Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-35148
NC_016114:4210173:422781342278134228145333Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein2e-35147
NC_018750:2696000:270005527000552700384330Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein5e-35146
NC_003888:5042283:504732850473285047663336Streptomyces coelicolor A3(2), complete genomehypothetical protein6e-33139
NC_018750:2118907:213446921344692134804336Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-31134
NC_021177:4221309:424049142404914240880390Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein2e-25114
NC_015957:10403997:104248481042484810425237390Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein3e-25113
NC_015957:639774:645263645263645649387Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein8e-1889
NC_014815:3272791:328498632849863285360375Micromonospora sp. L5 chromosome, complete genomehypothetical protein6e-1682.8
NC_014391:6000834:601300360130036013353351Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-1581.6
NC_009953:1364500:137074113707411371115375Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein1e-1478.6
NC_015434:6508500:652015865201586520532375Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein1e-1374.7
NC_013947:326980:341159341159341521363Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-1374.3
NC_013729:380312:396767396767397189423Kribbella flavida DSM 17836, complete genomehypothetical protein1e-1271.6
NC_013729:5982000:599310759931075993520414Kribbella flavida DSM 17836, complete genomehypothetical protein3e-1270.5
NC_013729:3573000:359006335900633590473411Kribbella flavida DSM 17836, complete genomehypothetical protein9e-1268.9
NC_009142:1242850:125785712578571258282426Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein2e-1167.4
NC_009142:7820251:782827978282797828716438Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein2e-0961.6
NC_006363:36959:3982739827419502124Nocardia farcinica IFM 10152 plasmid pNF2, complete sequencehypothetical protein3e-0960.5
NC_015434:6020178:6037051603705160381571107Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein3e-0650.4