Pre_GI: BLASTP Hits

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Query: NC_010572:3925803:3931242 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 3931242, End: 3931898, Length: 657

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016114:4210173:423223942322394232925687Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein2e-91334
NC_016114:3008500:302911030291103029805696Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein3e-73274
NC_020054:2260500:228978422897842290443660Fibrella aestuarina BUZ 2 drat genomehypothetical protein7e-47186
NC_016114:4210173:423292242329224233572651Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein3e-39161
NC_021177:4221309:424441042444104245108699Streptomyces fulvissimus DSM 40593, complete genomePhage DNA methylase7e-37153
NC_014210:5270643:528936152893615289996636Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein1e-36152
NC_016114:3008500:302980230298023030467666Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein1e-34145
NC_009142:7820251:783679978367997837473675Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein5e-34144
NC_010572:4181403:420094042009404201680741Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-32138