Pre_GI: BLASTP Hits

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Query: NC_010572:3363830:3410061 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 3410061, End: 3410528, Length: 468

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:3525588:353665335366533537087435Kitasatospora setae KM-6054, complete genomeputative large-conductance mechanosensitive channel3e-25114
NC_013510:991827:100630710063071006711405Thermomonospora curvata DSM 43183, complete genomelarge conductance mechanosensitive channel protein3e-21100
NC_013595:9547254:955105695510569551460405Streptosporangium roseum DSM 43021, complete genomelarge conductance mechanosensitive channel protein4e-1787
NC_013171:1364464:138535613853561385766411Anaerococcus prevotii DSM 20548, complete genomelarge conductance mechanosensitive channel protein4e-1167
NC_007777:75885:886998869989094396Frankia sp. CcI3, complete genomelarge conductance mechanosensitive channel protein3e-1064.3
NC_008529:264000:266698266698267174477Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeLarge-conductance mechanosensitive channel1e-0962
NC_016002:1326500:133847113384711338902432Pseudogulbenkiania sp. NH8B, complete genomelarge conductance mechanosensitive channel protein2e-0858.2
NC_017186:9120711:915435891543589154774417Amycolatopsis mediterranei S699 chromosome, complete genomelarge conductance mechanosensitive channel, MscL family protein5e-0857
NC_010162:9727465:973099097309909731439450Sorangium cellulosum 'So ce 56', complete genomelarge conductance mechanosensitive channel7e-0856.2
NC_015389:905165:922842922842923309468Coriobacterium glomerans PW2 chromosome, complete genomelarge conductance mechanosensitive channel protein9e-0855.8
NC_010814:155834:163539163539163982444Geobacter lovleyi SZ, complete genomelarge conductance mechanosensitive channel protein1e-0755.1
NC_014935:1668461:169005016900501690484435Nitratifractor saLSUginis DSM 16511 chromosome, complete genomelarge conductance mechanosensitive channel protein2e-0754.7
NC_015957:639774:653343653343653771429Streptomyces violaceusniger Tu 4113 chromosome, complete genomelarge conductance mechanosensitive channel protein4e-0753.9
NC_013174:2163947:216573421657342166132399Jonesia denitrificans DSM 20603, complete genomelarge conductance mechanosensitive channel protein1e-0652
NC_011027:1024995:104691910469191047374456Chlorobaculum parvum NCIB 8327, complete genomelarge conductance mechanosensitive channel protein3e-0650.8