Pre_GI: BLASTP Hits

Some Help

Query: NC_010572:1293786:1305622 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 1305622, End: 1306470, Length: 849

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:7159654:716888171688817169729849Streptomyces fulvissimus DSM 40593, complete genomeTatD-related deoxyribonuclease2e-142505
NC_018750:6950695:696268769626876963535849Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein1e-127455
NC_018524:1279156:128064612806461281515870Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometatD related DNase family protein5e-100364
NC_010162:1222000:123164212316421232526885Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-90332
NC_014655:424486:430744430744431742999Leadbetterella byssophila DSM 17132 chromosome, complete genometatd-related deoxyribonuclease2e-78292
NC_010546:4590994:459536345953634596289927Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative TatD DNase-like metal-dependent hydrolase1e-77290
NC_010655:1160384:118161111816111182426816Akkermansia muciniphila ATCC BAA-835, complete genomeTatD-related deoxyribonuclease2e-46186
NC_008010:1:410641064939834Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceTatD-related deoxyribonuclease1e-44180
NC_014658:417537:421695421695422450756Methanothermus fervidus DSM 2088 chromosome, complete genometatd-related deoxyribonuclease1e-1687.4
NC_013887:1383127:139638713963871397142756Methanocaldococcus sp. FS406-22 chromosome, complete genomeTatD-related deoxyribonuclease1e-1584
NC_003551:478065:497572497572498342771Methanopyrus kandleri AV19, complete genomePredicted metal-dependent hydrolase of the TIM-barrel fold6e-1581.6
NC_014122:967194:975093975093975839747Methanocaldococcus infernus ME chromosome, complete genomeTatD-related deoxyribonuclease3e-1479
NC_009635:985935:986679986679987434756Methanococcus aeolicus Nankai-3 chromosome, complete genomeTatD-related deoxyribonuclease4e-1375.5
NC_007503:1111457:112816111281611128922762Carboxydothermus hydrogenoformans Z-2901, complete genomehydrolase, TatD family5e-1272