Pre_GI: BLASTP Hits

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Query: NC_010501:4311873:4329115 Pseudomonas putida W619, complete genome

Start: 4329115, End: 4329516, Length: 402

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1738500:176425217642521764752501Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-63240
NC_009654:1729159:175096517509651751495531Marinomonas sp. MWYL1, complete genometRNA/rRNA methyltransferase (SpoU)5e-33139
NC_008577:1690946:171170417117041712312609Shewanella sp. ANA-3 chromosome 1, complete sequencetRNA/rRNA methyltransferase (SpoU)9e-33138
NC_008321:1636148:165702016570201657628609Shewanella sp. MR-4, complete genometRNA/rRNA methyltransferase (SpoU)1e-32137
NC_008322:1708631:172838317283831728991609Shewanella sp. MR-7, complete genometRNA/rRNA methyltransferase (SpoU)1e-32137
NC_016628:133841:148583148583149101519Vibrio furnissii NCTC 11218 chromosome 2, complete sequence23S rRNA methyltransferase7e-32135
NC_011663:1867000:188583418858341886583750Shewanella baltica OS223 chromosome, complete genometRNA/rRNA methyltransferase SpoU2e-31134
NC_016111:695250:709948709948710670723Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1478.2
NC_006361:4149701:416077141607714161238468Nocardia farcinica IFM 10152, complete genomehypothetical protein9e-1372.4
NC_011420:2803196:281897528189752819541567Rhodospirillum centenum SW, complete genomeRNA methyltransferase, TrmH family, putative4e-1270.1
NC_006138:225832:251813251813252295483Desulfotalea psychrophila LSv54, complete genomehypothetical protein4e-1063.2
NC_015167:3469968:347199834719983472456459Cellulophaga lytica DSM 7489 chromosome, complete genometRNA/rRNA methyltransferase SpoU1e-0755.1