Pre_GI: BLASTP Hits

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Query: NC_010498:1094000:1105889 Escherichia coli SMS-3-5, complete genome

Start: 1105889, End: 1106608, Length: 720

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:4355335:437758243775824378316735Salmonella bongori NCTC 12419, complete genomeaspartate racemase3e-57221
NC_012125:4716000:474932047493204750054735Salmonella enterica subsp. enterica serovar Paratyphi C strainaspartate racemase1e-55216
NC_006905:4638707:467200546720054672739735Salmonella enterica subsp. enterica serovar Choleraesuis strputative aspartate racemase1e-55216
NC_014618:4657719:468570046857004686434735Enterobacter cloacae SCF1 chromosome, complete genomeaspartate racemase7e-55213
NC_014500:1646854:166670616667061667422717Dickeya dadantii 3937 chromosome, complete genomeputative aspartate racemase2e-47188
NC_000961:597385:597385597385598071687Pyrococcus horikoshii OT3, complete genomeaspartate racemase4e-38157
NC_013421:1954915:195752019575201958236717Pectobacterium wasabiae WPP163, complete genomeaspartate racemase5e-34144
NC_011295:1120584:112754711275471128266720Coprothermobacter proteolyticus DSM 5265, complete genomeaspartate racemase8e-33140
NC_017223:51180:536235362354357735Bordetella pertussis CS chromosome, complete genomeputative aspartate/glutamate racemase5e-32137
NC_002929:52500:536235362354357735Bordetella pertussis Tohama I, complete genomeputative aspartate/glutamate racemase5e-32137
NC_007948:4620661:462609346260934626818726Polaromonas sp. JS666, complete genomeAspartate racemase1e-31136
NC_016830:4639388:4645685464568546471811497Pseudomonas fluorescens F113 chromosome, complete genomeaspartate racemase8e-29127
NC_009142:5647737:565601356560135656768756Saccharopolyspora erythraea NRRL 2338, complete genomeaspartate racemase2e-27122
NC_015677:1460000:146540814654081466145738Ramlibacter tataouinensis TTB310 chromosome, complete genomeaspartate racemase3e-26118
NC_020272:3396800:342665734266573427337681Bacillus amyloliquefaciens IT-45, complete genomeaspartate racemase5e-1788.2
NC_019842:484933:522218522218522898681Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,aspartate racemase9e-1787
NC_020410:495184:514630514630515310681Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative amino-acid racemase1e-1686.7
NC_009725:496443:528210528210528890681Bacillus amyloliquefaciens FZB42, complete genomeRacX2e-1686.3
NC_017190:466236:479815479815480495681Bacillus amyloliquefaciens LL3 chromosome, complete genomeamino acid racemase2e-1685.9
NC_014551:483773:493886493886494566681Bacillus amyloliquefaciens DSM 7, complete genomeamino acid racemase2e-1685.9
NC_017188:461177:481365481365482045681Bacillus amyloliquefaciens TA208 chromosome, complete genomeaspartate racemase4e-1581.6
NC_017191:467207:487387487387488067681Bacillus amyloliquefaciens XH7 chromosome, complete genomeamino acid racemase4e-1581.6
NC_013665:415998:434716434716435417702Methanocella paludicola SANAE, complete genomeaspartate racemase7e-1580.9
NC_015681:401084:407809407809408528720Thermodesulfatator indicus DSM 15286 chromosome, complete genomeaspartate racemase2e-1479.3
NC_013192:1824174:182969618296961830391696Leptotrichia buccalis DSM 1135, complete genomeaspartate racemase2e-1376.3
NC_003413:1521080:155854015585401559235696Pyrococcus furiosus DSM 3638, complete genomeputative aspartate racemase6e-1374.3
NC_011883:1182000:119259811925981193314717Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,aspartate racemase8e-1373.9
NC_016147:2266419:226973222697322270424693Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative resistance protein1e-1273.2
NC_020410:2509057:251292025129202513618699Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePutative aspartate racemase2e-1272.4
NC_014551:2510000:254602625460262546724699Bacillus amyloliquefaciens DSM 7, complete genomeAspartate racemase3e-1272
NC_013517:4208939:423640342364034237098696Sebaldella termitidis ATCC 33386, complete genomeaspartate racemase9e-1270.5
NC_016147:2266419:227886422788642279574711Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative resistance protein1e-1170.1
NC_016609:6750111:678376867837686784457690Niastella koreensis GR20-10 chromosome, complete genomeaspartate racemase3e-1168.6
NC_014011:1264165:127799512779951278681687Aminobacterium colombiense DSM 12261 chromosome, complete genomeaspartate racemase6e-1167.8
NC_007086:2887875:296496129649612965665705Xanthomonas campestris pv. campestris str. 8004, complete genomeputative resistance protein7e-1167.4
NC_008392:1029134:105709610570961057800705Burkholderia cepacia AMMD chromosome 3, complete sequenceaspartate racemase9e-1167.4
NC_010557:679656:725608725608726225618Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceaspartate racemase1e-1067
NC_012881:3520956:353218835321883532877690Desulfovibrio salexigens DSM 2638, complete genomeaspartate racemase2e-1066.2
NC_013926:829665:834044834044834721678Aciduliprofundum boonei T469 chromosome, complete genomeaspartate racemase2e-1066.2
NC_019942:987134:101040910104091011083675Aciduliprofundum sp. MAR08-339, complete genomeaspartate racemase2e-1065.9
NC_014006:924417:936197936197936892696Sphingobium japonicum UT26S chromosome 1, complete genomeputative aspartate/glutamate racemase5e-1064.7
NC_016048:3611146:362779336277933628488696Oscillibacter valericigenes Sjm18-20, complete genomeaspartate racemase6e-1064.3
NC_017075:3165858:319285731928573193573717Rubrivivax gelatinosus IL144, complete genomeaspartate racemase8e-1063.9
NC_009348:3819271:384248838424883843207720Aeromonas salmonicida subsp. salmonicida A449, complete genomeaspartate racemase1e-0963.9
NC_011751:3285646:3286568328656832876351068Escherichia coli UMN026 chromosome, complete genomeputative racemase1e-0963.9
NC_011750:3407500:340847734084773409169693Escherichia coli IAI39 chromosome, complete genomeputative racemase1e-0963.5
NC_009801:3175714:317663631766363177328693Escherichia coli E24377A, complete genomeaspartate racemase family protein1e-0963.2
CP002516:903241:935341935341936033693Escherichia coli KO11, complete genomeaspartate racemase1e-0963.2
NC_002695:3702344:370234437023443703036693Escherichia coli O157:H7 str. Sakai, complete genomeputative resistance proteins1e-0963.2
CU928145:3196173:319709531970953197787693Escherichia coli 55989 chromosome, complete genomeputative racemase1e-0963.2
CP002185:3167738:317004431700443170736693Escherichia coli W, complete genomepredicted racemase1e-0963.2
CU928160:3030324:303124630312463031938693Escherichia coli IAI1 chromosome, complete genomeputative racemase1e-0963.2
NC_013353:3474077:347499934749993475691693Escherichia coli O103:H2 str. 12009, complete genomeracemase2e-0963.2
AP010958:3474077:347499934749993475691693Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted racemase2e-0963.2
NC_002655:3769643:376964337696433770335693Escherichia coli O157:H7 EDL933, complete genomeputative resistance proteins2e-0963.2
NC_011748:3196173:319709531970953197787693Escherichia coli 55989, complete genomeputative racemase1e-0963.2
NC_010468:906957:940068940068940760693Escherichia coli ATCC 8739, complete genomeaspartate racemase1e-0963.2
NC_009800:2995958:299826429982642998956693Escherichia coli HS, complete genomeaspartate racemase family protein1e-0963.2
NC_016902:903241:935341935341936033693Escherichia coli KO11FL chromosome, complete genomeaspartate racemase1e-0963.2
NC_016822:3282654:328496032849603285652693Shigella sonnei 53G, complete genomeputative racemase1e-0963.2
NC_013941:3540420:354042035404203541112693Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeresistance protein1e-0963.2
NC_013364:3552284:355320635532063553898693Escherichia coli O111:H- str. 11128, complete genomeputative racemase1e-0963.2
NC_013361:3867558:386848038684803869172693Escherichia coli O26:H11 str. 11368 chromosome, complete genomeracemase1e-0963.2
NC_013008:3761467:376146737614673762159693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeracemase1e-0963.2
NC_011741:3030324:303124630312463031938693Escherichia coli IAI1 chromosome, complete genomeputative racemase1e-0963.2
NC_011415:3217796:321871832187183219410693Escherichia coli SE11 chromosome, complete genomeputative racemase1e-0963.2
NC_011353:3805819:380674138067413807433693Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeracemase1e-0963.2
AC_000091:2976293:297859929785992979291693Escherichia coli W3110 DNA, complete genomepredicted racemase2e-0962.8
NC_000913:2975659:297796529779652978657693Escherichia coli K12, complete genomepredicted racemase2e-0962.8
NC_010473:3069529:307183530718353072527693Escherichia coli str. K-12 substr. DH10B, complete genomepredicted racemase2e-0962.8
NC_012759:2862807:286511328651132865805693Escherichia coli BW2952 chromosome, complete genomeputative racemase2e-0962.8
NC_011026:1681852:169944916994491700183735Chloroherpeton thalassium ATCC 35110, complete genomeaspartate racemase2e-0962.8
NC_021182:554000:564461564461565159699Clostridium pasteurianum BC1, complete genomeaspartate racemase2e-0859.7
NC_021182:2536000:255080925508092551507699Clostridium pasteurianum BC1, complete genomeaspartate racemase2e-0859.7
NC_015556:515641:524448524448525146699Pseudomonas fulva 12-X chromosome, complete genomeaspartate racemase3e-0858.9
NC_015500:159199:176739176739177431693Treponema brennaborense DSM 12168 chromosome, complete genomeaspartate racemase3e-0858.5
NC_007948:5026122:504146750414675042198732Polaromonas sp. JS666, complete genomeAspartate racemase6e-0857.8
NC_010424:1563033:159117515911751591996822Candidatus Desulforudis audaxviator MP104C, complete genomeglutamate racemase7e-0857.8
NC_009712:2092440:210683321068332107555723Candidatus Methanoregula boonei 6A8, complete genomeaspartate racemase2e-0756.2
NC_013446:2062862:207646020764602077155696Comamonas testosteroni CNB-2, complete genomeaspartate racemase2e-0756.2
NC_016612:361417:374528374528375220693Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative racemase3e-0755.5