Pre_GI: BLASTP Hits

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Query: NC_010473:1384000:1386254 Escherichia coli str. K-12 substr. DH10B, complete genome

Start: 1386254, End: 1387201, Length: 948

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007384:307013:325878325878326759882Shigella sonnei Ss046, complete genome1e-156552
NC_016602:2037162:205856720585672059385819Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceDNA-binding protein transcriptional activator3e-101368
NC_005126:142500:146503146503147273771Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-1478.2
NC_004337:3590323:372325937232593724107849Shigella flexneri 2a str. 301, complete genomeputative regulator2e-1273.6
NC_011830:4645453:465649246564924657265774Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, IclR family8e-1271.2
NC_016514:506611:509638509638510396759Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YagI1e-1170.5
NC_000913:272071:287628287628288386759Escherichia coli K12, complete genomeCP4-6 prophage; predicted DNA-binding transcriptional regulator2e-1170.1
AC_000091:273325:287628287628288386759Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator2e-1170.1
NC_007503:1111457:113341811334181134203786Carboxydothermus hydrogenoformans Z-2901, complete genometranscriptional regulator, IclR family4e-1168.9
NC_014121:677799:677799677799678557759Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage predicted DNA-binding transcriptional regulator4e-1168.9
NC_007951:1711223:171944717194471720283837Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, IclR family9e-1167.8
NC_016641:2476634:247877124787712479514744Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator1e-1067.4
NC_007948:360199:390220390220391011792Polaromonas sp. JS666, complete genometranscriptional regulator, IclR family2e-1067
NC_013929:5850599:5866255586625558680181764Streptomyces scabiei 87.22 chromosome, complete genomeIclR family transcriptional regulator3e-1066.2
NC_007644:416000:418409418409419215807Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, IclR family3e-1066.2
NC_010002:1879220:195224719522471953035789Delftia acidovorans SPH-1, complete genometranscriptional regulator, IclR family5e-1065.5
NC_014206:1618988:162671116267111627487777Geobacillus sp. C56-T3 chromosome, complete genomeIclR family transcriptional regulator8e-1064.7
NC_006510:1995916:201138620113862012162777Geobacillus kaustophilus HTA426, complete genometranscriptional regulator9e-1064.7
NC_015732:684000:686748686748687509762Spirochaeta caldaria DSM 7334 chromosome, complete genomeIclR family transcriptional regulator1e-0963.9
NC_011001:163813:181278181278182174897Burkholderia cenocepacia J2315 chromosome 2, complete sequencetranscriptional regulator KdgR2e-0963.5
NC_015589:2447132:244890124489012449674774Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator IclR2e-0963.5
NC_015677:1460000:147130114713011472017717Ramlibacter tataouinensis TTB310 chromosome, complete genomeIclR family transcriptional regulator2e-0963.2
NC_007963:317291:335808335808336599792Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, IclR family4e-0962.4
NC_013510:5394432:540096854009685401714747Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, IclR family4e-0962.4
NC_014652:163347:170037170037170810774Caldicellulosiruptor hydrothermalis 108 chromosome, completetranscriptional regulator, iclr family6e-0961.6
NC_015565:2027279:204943020494302050236807Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeIclR family transcriptional regulator1e-0861.2
NC_011740:1494796:151502815150281515831804Escherichia fergusonii ATCC 35469, complete genomeputative transcriptional regulator protein1e-0860.8
NC_014392:2311243:231796223179622318795834Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, IclR family2e-0860.5
NC_015410:3003417:301342030134203014208789Pseudomonas mendocina NK-01 chromosome, complete genomeIclR family transcriptional regulator2e-0860.1
NC_008593:640000:648290648290649051762Clostridium novyi NT, complete genometranscription regulator (IclR family) BH21372e-0860.1
NC_014721:2043910:204995520499552050749795Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetranscriptional regulator, iclr family2e-0859.7
NC_014657:2236193:225991522599152260712798Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, iclr family3e-0859.3
NC_014623:1633889:163496616349661635784819Stigmatella aurantiaca DW4/3-1 chromosome, complete genometranscriptional regulator4e-0859.3
NC_015949:428923:438325438325439119795Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeIclR family transcriptional regulator6e-0858.5
NC_015949:47414:557195571956513795Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeIclR family transcriptional regulator6e-0858.5
NC_003888:6853107:686865768686576869469813Streptomyces coelicolor A3(2), complete genometranscriptional regulator for glyoxylate bypass6e-0858.5
NC_014931:5573942:559204755920475592841795Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, IclR family6e-0858.5
NC_002678:5060670:507867250786725079481810Mesorhizobium loti MAFF303099, complete genomehypothetical protein7e-0858.2
NC_008786:2809985:2829239282923928311461908Verminephrobacter eiseniae EF01-2, complete genomeregulatory proteins, IclR1e-0757.8
NC_010552:2454776:245477624547762455564789Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, IclR family1e-0757.4
NC_009512:5920960:593641859364185937254837Pseudomonas putida F1, complete genomeregulatory protein, IclR2e-0757
NC_008786:492363:510295510295511062768Verminephrobacter eiseniae EF01-2, complete genome2e-0756.6
NC_003305:1743939:174486317448631745633771Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, IclR family3e-0756.2
NC_008148:792610:805439805439806221783Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, IclR family4e-0755.8
NC_003063:304962:329125329125329955831Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein4e-0755.8
NC_012912:4071859:409679440967944097600807Dickeya zeae Ech1591, complete genometranscriptional regulator, IclR family7e-0755.1
NC_015067:2136048:213784721378472138722876Bifidobacterium longum subsp. longum JCM 1217, complete genometranscriptional regulator7e-0755.1
NC_009076:2050621:206588220658822066298417Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein7e-0755.1
NC_017986:5605197:563030556303055631078774Pseudomonas putida ND6 chromosome, complete genomeregulatory protein IclR6e-0755.1
NC_013929:1670402:167536316753631676148786Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator9e-0754.7
NC_012521:148886:165731165731166522792Rhodococcus opacus B4 plasmid pROB02, complete sequenceputative IclR family transcriptional regulator9e-0754.7
NC_015052:2181514:218331321833132184188876Bifidobacterium longum subsp. infantis 157F, complete genometranscriptional regulator3e-0653.1
NC_014656:1829336:186474318647431865618876Bifidobacterium longum subsp. longum BBMN68 chromosome, completeiclr-type transcriptional regulator3e-0653.1
NC_016943:1560000:157046615704661571323858Blastococcus saxobsidens DD2, complete genomeputative transcription regulator, IclR family2e-0653.1
NC_018691:198909:215686215686216465780Alcanivorax dieselolei B5 chromosome, complete genomeBeta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family4e-0652.8
NC_010473:247429:2617322617322639362205Escherichia coli str. K-12 substr. DH10B, complete genome4e-0652.4
NC_015589:2281054:228220522822052283017813Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator IclR5e-0652
NC_018581:3646489:365874036587403659486747Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator5e-0652
NC_014500:2589089:259686025968602597651792Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional regulatory protein KdgR9e-0651.2
NC_015573:813000:839785839785840549765Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeIclR family transcriptional regulator1e-0551.2