Pre_GI: BLASTP Hits

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Query: NC_010407:3174470:3183844 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3183844, End: 3185292, Length: 1449

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004663:2935060:2935060293506029362351176Bacteroides thetaiotaomicron VPI-5482, complete genomesite-specific DNA-methyltransferase5e-27122
NC_009659:3520093:3529519352951935306371119Janthinobacterium sp. Marseille chromosome, complete genomesite-specific DNA-methyltransferase1e-25118
NC_011666:2335765:2348682234868223498631182Methylocella silvestris BL2, complete genomeAdenine-specific DNA methylase-like protein2e-1687.8
NC_008390:2018201:2028310202831020294671158Burkholderia cepacia AMMD chromosome 1, complete sequenceAdenine-specific DNA methylase-like protein2e-1584.3
NC_012225:1375362:1376026137602613770811056Brachyspira hyodysenteriae WA1, complete genomeadenine-specific methyltransferase3e-1170.1