Pre_GI: BLASTP Hits

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Query: NC_010407:3132683:3148752 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3148752, End: 3150128, Length: 1377

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016590:548312:5620925620925634021311Burkholderia sp. YI23 chromosome 3, complete sequenceCodB2e-76286
NC_014562:1935088:1951165195116519524811317Pantoea vagans C9-1 chromosome, complete genomePutative permease6e-67255
NC_014618:57707:7812278122794111290Enterobacter cloacae SCF1 chromosome, complete genomecytosine/purines uracil thiamine allantoin permease6e-56218
NC_013422:1732677:1732677173267717340471371Halothiobacillus neapolitanus c2, complete genomepermease for cytosine/purines uracil thiamine allantoin4e-46186
NC_013406:3926531:3927768392776839290451278Paenibacillus sp. Y412MC10 chromosome, complete genomepermease for cytosine/purines uracil thiamine allantoin1e-1378.2