Pre_GI: BLASTP Hits

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Query: NC_010407:3132683:3145443 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3145443, End: 3145763, Length: 321

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015434:666692:681922681922682635714Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein8e-26115
NC_014210:5048502:505738250573825058191810Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Excinuclease ABC C subunit domain protein1e-21102
NC_010338:2443765:245486224548622455599738Caulobacter sp. K31, complete genomehypothetical protein1e-0755.1
NC_011979:773673:779690779690780412723Geobacter sp. FRC-32, complete genomeExcinuclease ABC C subunit domain protein1e-0755.1