Pre_GI: BLASTP Hits

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Query: NC_010407:3132683:3135732 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3135732, End: 3136430, Length: 699

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020126:4430142:443014244301424430846705Myxococcus stipitatus DSM 14675, complete genomeHAD superfamily hydrolase8e-25113
NC_015711:5479879:548133154813315482026696Myxococcus fulvus HW-1 chromosome, complete genomeHAD superfamily hydrolase2e-22105
NC_017030:6252756:627250362725036273198696Corallococcus coralloides DSM 2259 chromosome, complete genomeHAD superfamily hydrolase7e-22103
NC_005125:4117096:413694041369404137626687Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-1685.5
NC_013595:9651019:965620796562079656896690Streptosporangium roseum DSM 43021, complete genomehypothetical protein7e-1684
NC_011060:459615:496319496319497020702Pelodictyon phaeoclathratiforme BU-1, complete genomeHaloacid dehalogenase domain protein hydrolase6e-1477.8
NC_017186:7480714:749122374912237491939717Amycolatopsis mediterranei S699 chromosome, complete genomehaloacid dehalogenase1e-1376.6
NC_014318:7480669:749117874911787491894717Amycolatopsis mediterranei U32 chromosome, complete genomehaloacid dehalogenase-like hydrolase1e-1376.6
NC_013131:10370765:103755911037559110376265675Catenulispora acidiphila DSM 44928, complete genomeHaloacid dehalogenase domain protein hydrolase2e-1375.9
NC_015635:5222000:523948952394895240178690Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-1272.8
NC_016114:3439273:345475034547503455442693Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehaloacid dehalogenase5e-1271.2
NC_013131:8480384:849861384986138499302690Catenulispora acidiphila DSM 44928, complete genomeHaloacid dehalogenase domain protein hydrolase9e-1270.5
NC_019673:7738588:775169677516967752451756Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein9e-1270.5
NC_013929:2375613:246176924617692462479711Streptomyces scabiei 87.22 chromosome, complete genomehydrolase8e-1063.9
NC_013411:3201331:321710732171073217775669Geobacillus sp. Y412MC61, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 13e-0755.5
NC_014915:3207300:322307632230763223744669Geobacillus sp. Y412MC52 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 13e-0755.5
NC_014206:3239403:326031332603133260957645Geobacillus sp. C56-T3 chromosome, complete genomeHAD-superfamily hydrolase4e-0755.1
NC_006361:4521820:453441545344154535146732Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-0653.1
NC_004463:8401060:840106084010608401746687Bradyrhizobium japonicum USDA 110, complete genomeputative phosphoglycolate phosphatase2e-0652.8