Pre_GI: BLASTP Hits

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Query: NC_010407:1775227:1784339 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 1784339, End: 1785634, Length: 1296

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013174:309943:3295333295333308551323Jonesia denitrificans DSM 20603, complete genomeextracellular solute-binding protein family 13e-63243
NC_016582:7737930:7748351774835177497091359Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative substrate-binding transport lipoprotein2e-39163
NC_013093:2132284:2140041214004121413601320Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 13e-36152
NC_015671:874500:8980898980898994231335Cellvibrio gilvus ATCC 13127 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-33143
NC_013093:2895511:2906250290625029075991350Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 11e-31137
NC_013172:466300:4684394684394697731335Brachybacterium faecium DSM 4810, complete genomeABC-type sugar transport system, periplasmic component2e-29130
NC_017221:2268276:2284399228439922855711173Bifidobacterium longum subsp. longum KACC 91563 chromosome,ABC transporter substrate-binding protein9e-24111
NC_015052:2383865:2388169238816923895091341Bifidobacterium longum subsp. infantis 157F, complete genomeABC transporter substrate-binding protein3e-23110
NC_013721:1204566:1214195121419512156371443Gardnerella vaginalis 409-05, complete genomebacterial extracellular solute-binding protein7e-23108
NC_011593:391297:3971513971513985601410Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,family 1 extracellular solute-binding protein1e-1894.7
NC_017219:391100:3969663969663983541389Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative ABC transporter substrate binding component1e-1894.7
NC_016582:7946000:7952288795228879535861299Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMalE-type ABC sugar transport system periplasmic component1e-1688.2
NC_014829:3741843:3753994375399437552951302Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 13e-1376.6
NC_006322:2886404:2908934290893429102381305Bacillus licheniformis ATCC 14580, complete genomeAraN4e-1169.7
NC_011653:1574415:1579050157905015803001251Thermosipho africanus TCF52B, complete genomelactose-binding protein7e-0962.4
NC_015675:2567000:2580950258095025822211272Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-0962.4
NC_010572:2843589:2863797286379728650441248Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter substrate-binding protein1e-0861.2
NC_013521:302574:3359023359023371611260Sanguibacter keddieii DSM 10542, complete genomeABC-type sugar transport system, periplasmic component2e-0861.2
NC_006087:237500:2634602634602646291170Leifsonia xyli subsp. xyli str. CTCB07, complete genomemaltose/trehalose porter2e-0860.8
NC_016641:1984206:1986876198687619881261251Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein5e-0859.3
NC_014364:1899983:1918380191838019196721293Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 16e-0859.3
NC_014169:1909482:1922288192228819235621275Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 1 extracellular solute-binding protein1e-0758.2
NC_011567:2327870:2334876233487623362251350Anoxybacillus flavithermus WK1, complete genomeABC-type sugar transport system, periplasmic component2e-0757.8
NC_014328:180482:2017442017442030091266Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative solute-binding protein5e-0756.2
NC_014206:1694330:1714328171432817156381311Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-0755.5
NC_014844:659829:7003187003187016251308Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0654.7
NC_013406:303218:3367583367583380501293Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0654.3
NC_009089:3998347:3999672399967240009821311Clostridium difficile 630, complete genomeABC transporter, solute-binding protein2e-0654.3
NC_013316:3863728:3865053386505338663631311Clostridium difficile R20291, complete genomeABC transporter, solute-binding protein3e-0653.5
NC_016935:2567039:2601872260187226032001329Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein9e-0652