Pre_GI: BLASTP Hits

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Query: NC_010407:1775227:1778130 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 1778130, End: 1778600, Length: 471

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:177824:193462193462193971510Dickeya dadantii 3937 chromosome, complete genomeputative MutT/nudix-family hydrolase2e-1581.6
NC_012721:770651:800427800427800882456Burkholderia glumae BGR1 chromosome 2, complete genomeMutT/nudix-family hydrolase3e-1580.9
NC_020210:1704500:174299417429941743419426Geobacillus sp. GHH01, complete genomeNUDIX hydrolase6e-1476.6
NC_020210:1704500:170873917087391709164426Geobacillus sp. GHH01, complete genomeputative NUDIX hydrolase9e-1372.4
NC_011149:4677412:468246246824624682941480Salmonella enterica subsp. enterica serovar Agona str. SL483,nudix hydrolase8e-1269.3
NC_013283:113660:102591025910744486Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein8e-1269.3
NC_012490:3094857:3120233312023331212551023Rhodococcus erythropolis PR4, complete genomehypothetical protein1e-1168.9
NC_019673:1656680:167496116749611675455495Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1167.8
NC_018691:1293449:130579313057931306260468Alcanivorax dieselolei B5 chromosome, complete genomeNTP pyrophosphohydrolase1e-1065.9
NC_003888:6103534:610353461035346104052519Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0961.2
NC_010572:2216309:223042822304282230916489Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-0961.2
NC_009997:4091371:410241441024144102869456Shewanella baltica OS195, complete genomeNUDIX hydrolase3e-0960.8
NC_016901:4039335:405037840503784050833456Shewanella baltica OS678 chromosome, complete genomeNUDIX hydrolase3e-0960.8
NC_009665:3984080:399606239960623996574513Shewanella baltica OS185 chromosome, complete genomeNUDIX hydrolase5e-0960.1
NC_016109:5768000:577432457743245774740417Kitasatospora setae KM-6054, complete genomehypothetical protein6e-0959.7
NC_015434:4640769:464757246475724648087516Verrucosispora maris AB-18-032 chromosome, complete genomenudix hydrolase2e-0858.5
NC_007517:1998342:200510920051092005573465Geobacter metallireducens GS-15, complete genomeNUDIX hydrolase7e-0856.2
NC_013093:3996197:4007579400757940091561578Actinosynnema mirum DSM 43827, complete genomeNUDIX hydrolase2e-0755.1
NC_009483:2854500:287088028708802871296417Geobacter uraniireducens Rf4 chromosome, complete genomeNUDIX hydrolase9e-0752.8
NC_015671:2371632:239412423941242394615492Cellvibrio gilvus ATCC 13127 chromosome, complete genomeNUDIX hydrolase2e-0651.6
NC_013174:1459730:146944214694421469960519Jonesia denitrificans DSM 20603, complete genomeNUDIX hydrolase2e-0651.2
NC_008095:5312926:533388253338825334289408Myxococcus xanthus DK 1622, complete genomehydrolase, NUDIX family3e-0650.8
NC_021177:2309615:231270423127042313195492Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein4e-0650.4
NC_015711:7265439:728624172862417286648408Myxococcus fulvus HW-1 chromosome, complete genomeNUDIX family hydrolase4e-0650.4
NC_014391:3445672:345029834502983450711414Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNUDIX hydrolase4e-0650.4