Pre_GI: BLASTP Hits

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Query: NC_010334:1561691:1565690 Shewanella halifaxensis HAW-EB4, complete genome

Start: 1565690, End: 1566499, Length: 810

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:1516340:152043815204381521247810Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family1e-114412
NC_005139:2201820:225498422549842255754771Vibrio vulnificus YJ016 chromosome I, complete sequenceAraC-type DNA-binding domain-containing protein9e-1684.3
NC_016514:1627664:162959516295951630386792Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcM1e-1273.9
NC_011294:1048223:105059810505981051377780Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator1e-1170.9
NC_011147:1802535:181998218199821820761780Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator1e-1170.9
NC_006511:1808815:182479918247991825578780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbacterial regulatory protein, AraC family1e-1170.9
NC_010102:2020762:203451220345122035300789Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1170.5
NC_011205:1147556:115121611512161152004789Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator1e-1170.5
NC_003197:1170746:117274611727461173525780Salmonella typhimurium LT2, complete genomebacterial regulatory protein1e-1170.5
NC_016810:1126693:112906811290681129847780Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-1170.5
NC_016856:1128715:113109011310901131869780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sregulatory protein1e-1170.5
NC_016860:1168431:117043111704311171210780Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator1e-1170.5
NC_016863:1128381:113038111303811131160780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1regulatory protein1e-1170.5
NC_016857:1126693:112900511290051129847843Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74regulatory protein2e-1170.1
NC_017046:1127325:112926211292621130104843Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator2e-1170.1
NC_011274:1057887:105988710598871060666780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator2e-1170.1
NC_011149:1035990:104229310422931043081789Salmonella enterica subsp. enterica serovar Agona str. SL483,bacterial regulatory protein1e-1170.1
NC_011083:1173802:117746211774621178250789Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacterial regulatory protein1e-1170.1
NC_011094:1127983:113164311316431132431789Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein1e-1170.1
NC_012125:2687980:270174127017412702529789Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator1e-1170.1
NC_016831:1950650:196440919644091965197789Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator2e-1169.7
NC_015566:3417951:345056934505693451453885Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator5e-1065.1
NC_002505:514732:544362544362545177816Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, AraC/XylS family6e-1064.7
NC_013508:2356865:238499423849942385794801Edwardsiella tarda EIB202, complete genometranscriptional regulator, AraC family6e-1064.7
NC_012668:62500:751637516375978816Vibrio cholerae MJ-1236 chromosome 1, complete sequenceAraC family transcriptional regulator2e-0963.2
NC_016445:2938887:295541629554162956213798Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator AraC/XylS family2e-0963.2
NC_003198:1078113:1081781108178110832711491Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (pseudogene)2e-0962.8
NC_012779:2424967:244536924453692446169801Edwardsiella ictaluri 93-146, complete genometranscriptional regulator, AraC family protein2e-0962.8
NC_016832:1880174:189439218943921894934543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bacterial regulatory protein, AraC3e-0962.4
NC_007645:6407370:642240164224016423237837Hahella chejuensis KCTC 2396, complete genomeAraC-type DNA-binding domain-containing protein3e-0962.4
NC_012559:2353236:237476723747672375555789Laribacter hongkongensis HLHK9, complete genomeAraC-type DNA-binding domain-containing protein8e-0961.2
NC_015224:2017781:203018320301832030944762Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,AraC family transcriptional regulator8e-0960.8
NC_008800:2695977:272271627227162723585870Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,AraC family transcriptional regulator1e-0860.5
AC_000091:558920:570677570677571474798Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator6e-0858.2
NC_010473:498252:510009510009510806798Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted DNA-binding transcriptional regulator6e-0858.2
NC_000913:558920:570677570677571474798Escherichia coli K12, complete genomeDLP12 prophage; predicted DNA-binding transcriptional regulator6e-0858.2
NC_011353:2957962:296693429669342967731798Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAraC family transcriptional regulator6e-0858.2
NC_012759:461680:473437473437474234798Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative DNA-binding transcriptional regulator6e-0858.2
NC_012947:3231893:324153832415383242335798Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeAraC family transcriptional regulator6e-0858.2
NC_012967:531000:543344543344544141798Escherichia coli B str. REL606 chromosome, complete genomeputative DNA-binding transcriptional regulator6e-0858.2
NC_013008:2910567:292180529218052922602798Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA-binding transcriptional regulator6e-0858.2
NC_015761:2373967:239056023905602391471912Salmonella bongori NCTC 12419, complete genomeAraC family transcriptional regulator8e-0857.8
NC_007912:1924392:193926219392621940074813Saccharophagus degradans 2-40, complete genomeRhs element Vgr protein5e-0755.1
NC_011294:2890500:290249529024952903424930Salmonella enterica subsp. enterica serovar Enteritidis strAraC family transcriptional regulator1e-0654.3
NC_011274:2881306:289330028933002894229930Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AraC family transcriptional regulator1e-0654.3
NC_011147:2814664:282791828279182828847930Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator1e-0654.3
NC_011094:2913500:292504229250422925971930Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator HilD1e-0654.3
NC_010102:2967464:298081829808182981747930Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0654.3
NC_011149:2912219:292636429263642927293930Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator HilD1e-0654.3
NC_003197:3005842:301783630178363018765930Salmonella typhimurium LT2, complete genomeinvasion protein regulatory protein1e-0654.3
NC_006511:2819128:283238228323822833311930Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCAraC-family transcriptional regulator1e-0654.3
NC_016810:3028421:304041230404123041341930Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator1e-0654.3
NC_016831:2867766:287975928797592880688930Salmonella enterica subsp. enterica serovar Gallinarum/pullorumAraC family transcriptional regulator1e-0654.3
NC_012125:2938519:295174729517472952676930Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator9e-0754.3
NC_006905:2960260:297136329713632972292930Salmonella enterica subsp. enterica serovar Choleraesuis strregulatory helix-turn-helix proteins, araC family9e-0754.3
NC_011080:2982346:299434029943402995269930Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator HilD9e-0754.3
NC_017046:3027161:303915230391523040081930Salmonella enterica subsp. enterica serovar Typhimurium str. 798AraC family transcriptional regulator1e-0654.3
NC_016863:2974333:298632629863262987255930Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasion protein regulatory protein1e-0654.3
NC_016860:3029272:304126630412663042195930Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional regulator HilD1e-0654.3
NC_016857:3028421:304041230404123041341930Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74invasion protein regulatory protein1e-0654.3
NC_016856:3026426:303807330380733039002930Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasion protein regulatory protein1e-0654.3
NC_011083:2980356:299235029923502993279930Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator HilD1e-0653.9
NC_015761:2726000:273806627380662738995930Salmonella bongori NCTC 12419, complete genomeAraC family transcriptional regulator2e-0653.1
NC_018697:505915:5090685090685100901023Cycloclasticus sp. P1 chromosome, complete genomeAraC-family transcriptional regulator2e-0653.1
NC_011205:3050235:306222730622273063156930Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator HilD2e-0652.8
NC_016832:2829767:284300628430062843935930Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transcriptional regulator hilD3e-0652.4
NC_003198:2856596:286985028698502870779930Salmonella enterica subsp. enterica serovar Typhi str. CT18,AraC-family transcriptional regulator3e-0652.4
NC_004631:2842453:285570728557072856636930Salmonella enterica subsp. enterica serovar Typhi Ty2, completeAraC-family transcriptional regulator3e-0652.4
NC_010498:3988351:400490240049024005732831Escherichia coli SMS-3-5, complete genomeputative fimbrial operon positive regulatory protein FanR6e-0651.6